A. M. Tavolieri, D. T. Murray, I. Askenasy, J. M. Pennington, L. McGarry, C. B. Stanley, M. E. Stroupe. NADPH-dependent sulfite reductase flavoprotein adopts an extended conformation unique to this diflavin reductase. J Struct Biol. 2019 Feb 1;205(2):170-179. doi: 10.1016/j.jsb.2019.01.001. Link

M. R. Cepeda, L. McGarry, J. M. Pennington, J. Krzystek, M. E. Stroupe. The role of extended Fe4S4 cluster ligands in mediating sulfite reductase hemoprotein activity. Biochim Biophys Acta Proteins Proteom. 2018 Sep;1866(9):933-940. doi: 10.1016/j.bbapap.2018.05.013. Link

I. Askenasy, D. T. Murray, R. M. Andrews, V. N. Uversky, H. He, M. E. Stroupe. Structure-Function Relationships in the Oligomeric NADPH-Dependent Assimilatory Sulfite Reductase. Biochemistry. 2018 Jul 3;57(26):3764-3772. doi: 10.1021/acs.biochem.8b00446. Link

M. C. Johnson, M. Sena-Velez, B. K. Washburn, G. N. Platt, S. Lu, T. E. Brewer, J. S. Lynn, M. E. Stroupe, K. M. Jones. Structure, proteome and genome of Sinorhizobium meliloti phage ΦM5: A virus with LUZ24-like morphology and a highly mosaic genome. J Struct Biol2017 Dec;200(3):343-359. doi: 10.1016/j.jsb.2017.08.005. Link

M. C. Johnson*, H. Ghalei*, K. A. Doxtader, K. Karbstein, and M. E. Stroupe, 2017. Heterogeneity in Pre-40S Ribosomes. Structure. doi:10.1371/journal.pbio.1002480 Link

S. Khoshnevis, I. Askenasy, M. C. Johnson, M. D. Dattolo, C. L. Young-Erdos, M. E. Stroupe, and K. Karbstein, 2016. The DEAD-box Protein Rok1 Orchestrates 40S and 60S Ribosome Assembly by Promoting the Release of Rrp5 from Pre-40S Ribosomes to Allow for 60S Maturation. PLoS Biology. doi:10.1371/journal.pbio.1002480 Link 

I. Askenasy*, J. M. Pennington*, Y. Tao, A. G. Marshall, N. L. Young, W. Shang, and M. E. Stroupe. 2015. The N-terminal Domain of Escherichia coli Assimilatory NADPH-Sulfite Reductase Hemoprotein is an Oligomerization Domain that Mediates Holoenzyme Assembly. J. Biol. Chem., 290, 19319-19333. doi:10.1074/jbc.M115.662379 Link

Johnson, M. C., Tatum, K. B., Lynn, J. S., Brewer, T. E., Washburn, B. K., Stroupe, M. E., & Jones, K. M. (2015). Sinorhizobium meliloti phage ΦM9 defines a new group of T4-superfamily phages with unusual genomic features, but a common T=16 capsid. J. Virol., 10945-10958. doi:10.1128/JVI.01353-15 Link

M. Kopylov, H. W. Bass, and M. E. Stroupe. 2015. The Maize (Zea mays L.) nucleoside diphosphate kinase 1 (ZmNDPK1) gene encodes a human NM23-H2 homolog that binds and stabilizes G-quadruplex DNA. Biochemistry, 54, 1743-1757. doi:10.1021/bi501284 Link

H. Ghalei, F. X. Schaub, J. R. Doherty, Y. Noguchi, W. R. Roush, J. L. Cleveland, M. E. Stroupe, and K. Karbstein. 2015. J. Cell Biol.208, 745-759. doi: 10.1083/jcb.201409056 Link

C. M Andorf, M. Kopylov, D. Dobbs, K. E. Koch, M. E. Stroupe, C. J. Lawrence, and H. W. Bass. 2014. G-quadruplex (G4) motifs in the maize (Zea mays L.) genome are enriched at specific locations in thousands of genes coupled to energy status, hypoxia, low sugar, and nutrient deprivation. J. Genet. Genomics. 41(12):627-47 doi:10.1016/ Link

M. E. Stroupe*, T. Brewer, D. R. Sousa, and K. M. Jones. 2014. The structure of Sinorhizobium meliloti phage ΦM12, which has a novel T=19l triangulation number and is the founder of a new group of T4-superfamily phages. Virology, 450-451:205-212. doi:10.1016/j.virol.2013.11.019 Link

T. Brewer, M. E. Stroupe, K. M. Jones. 2014 The genome, proteome and phylogenetic analysis of Sinorhizobium meliloti phage ΦM12, the founder of a new group of T4-superfamily phages. Virology, 450-451: 84-97 doi: 10.1016/j.virol.2013.11.027 Link

D. R. Sousa, S. M. Stagg, and M. E. Stroupe. 2013. Cryo-EM structures of the Actin:Tropomyosin filament reveal the mechanism for the transition from C- the M-state. J, Mol. Biol., 425(22):4544-55. doi: 10.1016/j.jmb.2013.08.020  Link

K. W. Smith and M. E. Stroupe. 2012. Mutational analysis of sulfite reductase hemoprotein reveals the mechanism for coordinated electron and proton transfer. Biochemistry, 51(49):9857-68. doi: 10.1021/bi300947a  Link

M. E. Stroupe, C. Xu, B. J. Goode, and N. Grigorieff. 2009. Actin filament labels for localizing protein components in large complexes viewed by electron microscopy. RNA, 15:244-248  Link

Sache, C., J. Z. Chen, P. D. Coureux, M. E. Stroupe, M. Fändrich, and N. Grigorieff. 2007. High-resoluion electron microscopy of helical specimens: a fresh look at tobacco mosaic virus. JMB. 3:812-835,  Link

M. E. Stroupe*, T. Ø. Tange*, D. R. Thomas, M. J. Moore, N. Grigorieff (2006). “The three dimensional architecture of the EJC core.” JMB, 4, 743-9.  Link

T. Shibuya, T. Ø. Tange, M. E. Stroupe and M. J. Moore (2006). “Mutational analysis of human eIF4AIII identifies regions necessary for exon junction complex formation and nonsense-mediated mRNA decay.” RNA, 3, 360-374. Link

M. E. Stroupe, H. K. Leech, D. S. Daniels, M. J. Warren, and E. D. Getzoff (2003). “CysG structure reveals tetrapyrrole- binding features and novel regulation of siroheme biosynthesis.” Nat. Struct. Bio., 10, 1064-1073.  Link

W. B. Greenleaf, J. J. Perry, A. S. Hearn, D. E. Cabelli, J. R. Lepock, M. E. Stroupe, J. A. Tainer, D. S. Silverman (2004). “Role of hydrogen bonding in the active site of human manganese superoxide dismutase.” Biochemistry, 22, 7038-7045.  Link

A. S. Hearn, M. E. Stroupe, D. E. Cabelli, C. A. Ramilo, J. P. Luba, J. A. Tainer, H. S. Nick, and D. N. Silverman (2003). “Catalytic and Structural Effects of Amino Acid Substitution at Histidine 30 in Human Manganese Superoxide Dismutase: Insertion of Valine Cγ into the Substrate Access Channel.” Biochemistry, 10, 2781-9.  Link

M. E. Stroupe (2002). “Making and Using Siroheme: the x-ray Crystallographic Structures of Siroheme Synthase of Sulfite Reductase” thesis.

A. S. Hearn, M. E. Stroupe, D. E. Cabelli, J. R. Lepock, J. A. Tainer, H. S. Nick, and D. N. Silverman (2001). Kinetic analysis of product inhibition in human manganese superoxide dismutase. Biochemistry, 40, 12051-8. Link

V. J. Leveque, M. E. Stroupe, J. R. Lepock, D. E. Cabelli, J. A. Tainer, H. S. Nick, and D. N. Silverman (2000). Multiple replacements of glutamine 143 in human manganese superoxide dismutase: effects on structure, stability, and catalysis. Biochemistry, 39, 7131-7.  Link

Review articles and book chapters

M. E. Stroupe and E. D. Getzoff. “The role of siroheme in sulfite and nitrite reductases” in Tetrapyrroles: their birth, life, and death. ed. MJ Warren and A Smith. Landes Bioscience. 2005

M. E. Stroupe and E. D. Getzoff (2001). “Sulfite Reductase Hemoprotein” in Handbook of Metalloproteins. ed. A. Messerschmidt, R. Huber, T. Poulos, and K. Wieghardt. John Wiley and Sons, Ltd. Chichester.

M. E. Stroupe, M. Didonato, and J. A. Tainer (2001). “Manganese Superoxide Dismutase” in Handbook of Metalloproteins. ed. A. Messerschmidt, R. Huber, T. Poulos, and K. Wieghardt. John Wiley and Sons, Ltd. Chichester”